Software Engineer

Partners Healthcare System Boston , MA 02298

Posted 2 months ago

GENERAL SUMMARY/ OVERVIEW STATEMENT:

The Massachusetts General Hospital (MGH) Neurology Department, an affiliate of Harvard Medical School and a world leader in brain research, is seeking a software engineer to help launch a multi-center collaborative database for critical care data sharing through the Center for Neurotechnology and NeuroRecovery's ICU Precision Medicine Lab. This Collaborative Hospital Repository to Unlock Synergy (CHoRUS) in Data will foster collaborative infrastructure, tools for working with medical Big Data; support clinical process improvements that can benefit from Big Data analytics; and enable highly granular retrospective and prospective studies using MGH's data archives and via continual capture of new data. Funded projects supporting our lab include investigation of traumatic brain injury (NIH/NINDS), subarachnoid hemorrhage (NIH/NINDS), and COVID-19 (Department of Defense). Our team is building the data resources, models, algorithms, and pipelines needed to harness the power of medical Big Data in pursuit of these projects' objectives. We are looking for a software engineer who can thrive in pursuit of this mission alongside experts in critical care, statistics, time series analysis, machine learning, and computer science.

PRINCIPAL DUTIES AND RESPONSIBILITIES:

This position involves a wide range of responsibilities, including:

  • Developing and deploying software and apps that interact with clinical information systems and mobile devices, and with existing databases and software systems.

  • Developing software for real-time interaction with clinical devices, including EEG recording devices, bedside ICU monitors, and mobile heath monitoring devices.

  • Developing software that generates insightful summaries of large & complex datasets.

  • Organizing, manipulating and integrating new datasets across different formats and robust synchronization with existing datasets and databases.

  • Under general direction, developing innovative analytical methods to help collaborators interpret results and design follow-up research.

  • Providing support to neurology researchers to develop and implement data-analyses.

  • Contribute to manuscript preparation and project-team reports.

  • Actively participate in project team meetings and provide necessary technical tutorials to elevate the team's understanding of modern software stacks.

  • Design, write, test, tune, document, deploy, maintain and support new features, analysis methods and infrastructure.

  • Maintain computing infrastructure and software deployments.

  • Mentor teammates with less engineering experience and share knowledge of computer science best practices with the team.

  • Contribute to system architecture and design.

  • Refine software development processes and best practices.

SKILLS/ABILITIES/COMPETENCIES REQUIRED:

  • Demonstrated ability in developing software applications that either manage or analyze time series data and/or data from electronic health record using language such as one of the following Python, Matlab, R, C .

  • Expertise in relational and/or NO-SQL database management and ETL for batch processing.

  • Facility with "tools of the trade", e.g., Unix system administration, shell scripting, building and deployment tools, version control.

  • Proven ability to meet deadlines and work cooperatively in a small collaborative team.

  • Demonstrated capability as highly organized, a creative problem-solver.

  • Detail-oriented, self-motivated, and able to work independently as well as within cross-functional teams.

  • Ability to adapt to rapidly changing and high-demand environments.

  • Experience with AWS, GCP, or IBM Cloud Object Storage.

  • Experience with the Spark big data stack (Hadoop, Spark, etc.) a plus.

  • Comfort with probability, linear algebra, and data analysis, and experience processing or analyzing biological data.

  • Demonstrated proficiency with several of the following technologies: R, Python, Matlab, Javascript, Unix, C .

  • Excellent written and oral communication skills.

EDUCATION:

Minimal Bachelor's degree in Computer Science, or related field, Master's degree preferred.

EXPERIENCE:

3 years industry experience working in software development.

WORKING CONDITIONS:

The research coordinator will work within a team of physicians, clinical research coordinators, and physician-scientist neurologists. Work will be performed in various adult ICUs at MGH, in collaboration and with other academic hospitals on the MGH and MIT main campus.


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